Apple Cider Sourdough Muffins

5 from 4 votes
Jump to Recipe

Affiliate disclosure: This post may contain affiliate links. Please see our disclosure policy.

Enjoy a taste of fall with these apple cider sourdough muffins. Apple cider muffins are sweet, tender and filled with apple flavor from the apple cider, fresh apple and applesauce. The combination of warm spices, sourdough discard and cinnamon sugar give these sweet muffins the perfect balance of flavor. Quick to whip up and easy to bake, these muffins can be on your table in 40 minutes. Perfect for a quick snack or to start your morning with a yummy breakfast, make these apple cider sourdough muffins today!

A bowl of apple cider sourdough muffins with cinnamon sugar sprinkled on top and a bite taken out of one of the muffins.

Save this for later!

We'll email this post to you so it doesn't get lost in your open tabs 😉

Why You’ll Love Apple Cider Sourdough Muffins

  • Apple Flavor: These muffins get their apple flavor from apple cider, apples, and applesauce. If you want a rich apple flavor in your muffins, make sure you’re using good-quality apples! Or try my delicious Sourdough Apple Cider Donuts for a mild-flavored fall favorite.
  • Quick & Easy: These apple cider muffins only take 40 minutes from start to finish, and they are a great way to make use of fresh, seasonal apples.
  • Discard Recipe: I love finding seasonal recipes that make use of sourdough discard, and the sourdough makes these sourdough apple cider muffins so so good – just like with these Spinach Sourdough Banana Muffins!

Important Ingredients

  • Sourdough Discard: You can use fresh, bubbly sourdough starter if you want. If you don’t mind a more pronounced sourdough flavor, you can use refrigerated discard up to a week or two old.  I always use 100% hydration sourdough discard.
  • Sugar: Granulated sugar and brown sugar work together to give these muffins a sweet flavor. If you prefer a less sweet muffin, you can reduce the sugar by a few Tablespoons.
  • Flour: All-purpose flour works well for this recipe. I use an all-purpose flour with 11.5% protein content.
  • Spices: Ground cinnamon and nutmeg are used to enhance the flavor of the apple in these apple cider sourdough muffins.
  • Eggs: Eggs bring richness, a good texture and help muffins rise.
  • Greek Yogurt: Gives these muffins a tender crumb and keeps them moist. You can substitute sour cream if desired.
  • Vegetable Oil: Any neutral-flavored oil works well in this recipe. You can also substitute melted butter if desired.
  • Apple Cider: Apple cider is typically 100% apple juice (not made from concentrate). Store-bought “apple juice” is often made from concentrate. You can use apple juice in these muffins, but they won’t have the same apple flavor in them as fresh apple cider has. Be sure to save some cider to drink with your muffins!
  • Apples: Choose a flavor-forward apple. My favorites are honey crisp, pink lady and granny smith.
  • Applesauce: I prefer unsweetened applesauce in this recipe. Homemade or store-bought both work well.

How to Make Sourdough Apple Cider Muffins

Mixing Together Muffin Batter

Dry Ingredients: In a medium-sized bowl, whisk together the flour, baking soda, cinnamon, nutmeg and salt. Grate the apple and add on top of the dry ingredients. Fluff together.

Liquid Ingredients: Mix together the sourdough discard, brown sugar, white sugar and eggs. The discard will loosen up and start to combine with the sugars and egg. Add the yogurt, applesauce, oil, apple cider and vanilla extract. Whisk together until combined.

Mix together: Add the liquid ingredients to the top of the dry ingredients and stir until just combined with just a few dry streaks remaining. Be careful not to over-mix the batter. The less gluten that develops, the more light and tender the muffins will be.

Sprinkle Muffin Tops with Cinnamon Sugar

Prepare a 12-cup muffin tin with cooking spray, lining them with parchment squares or using muffin cups (spray the cups!). Put a scoop of batter in each tin, about 2/3 of the way full. Each cup can be used as this recipe makes 12-14 muffins. Generously sprinkle a cinnamon/sugar mixture over the tops of the muffins. This cinnamon/sugar mixture gives a crunchy and sweet muffin top texture.

Baking Apple Cider Sourdough Muffins

Put the muffins in a preheated 375°F oven and bake for about 20-22 minutes. Be careful not to open the oven door while the muffins bake. Stick a toothpick in the center of a muffin to check for doneness and remove from the oven when baked through. Let cool for 5-10 minutes in the muffin tin before removing to a cooling rack. Enjoy!

Substitutions

You can substitute apple juice for apple cider BUT the muffins will not have as much apple flavor. They will still be tender and delicious, just not quite the same apple flavor that fresh apple cider brings.

How to Store Leftovers

Leftover muffins can be stored at room temperature in an airtight container for a few days. If you plan to keep them longer than that, freeze any unused muffins for up to a few months.

Frequently Asked Questions

How do I store extra apple cider sourdough muffins?

Let muffins cool completely before storing in an airtight container or ziplock bag. I freeze extra muffins for up to 2 months.

Can I substitute apple juice for the apple cider?

You can, BUT the muffins will not have as much apple flavor. They will still be tender and delicious, just not quite the same apple flavor that fresh apple cider brings.

Do I need to grate the apple? Can I cut them into chunks?

I prefer this recipe with grated apple. The apple melts into the muffins instead of being a chunk of apple. If you prefer apple chunks, you can use those instead. If you really like chunks of apple, check out my sourdough discard apple cake.

5 from 4 votes

Apple Cider Sourdough Muffins

Apple cider muffins are sweet, tender and filled with apple flavor from the apple cider, fresh apple and applesauce that is used in these muffins. The combination of warm spices, sourdough discard and cinnamon/sugar give these sweet apple cider sourdough muffins the perfect balance of flavor for fall.
Prep: 20 minutes
Cook: 20 minutes
Total: 40 minutes
Servings: 12 muffins

Save this for later!

We’ll email this post to you so it doesn’t get lost in your open tabs 😉

Ingredients 

  • 250 grams all-purpose flour, about 1 2/3 cup
  • 6 grams baking soda, 1 teaspoon
  • 8 grams salt, 1 teaspoon
  • 4 grams ground cinnamon, 1 1/2 teaspoons
  • 1 gram nutmeg, 1/2 teaspoon
  • 100 grams sourdough discard, 100% hydration, see recipe notes
  • 70 grams granulated sugar, about 1/3 cup
  • 70 grams brown sugar, about 1/3 cup
  • 2 large eggs, about 100 grams total
  • 65 grams plain Greek yogurt, about 1/3 cup
  • 65 grams unsweetened applesauce, about 1/4 cup
  • 50 grams vegetable oil, about 1/4 cup, any neutral-flavored oil works
  • 75 grams apple cider, about 1/3 cup, see recipe notes
  • 4 grams vanilla extract, about 1 teaspoon
  • 120 grams grated apple, about 3/4 -1 cup, see recipe notes
  • cinnamon/sugar for sprinkling, see recipe notes

Instructions 

  • Preheat oven to 375°F.
  • To a medium-sized bowl whisk together the flour, baking soda, cinnamon, nutmeg and salt. Whisk to combine.
  • Grate an apple. Add the grated apple to the flour mixture and fluff to combine.
  • To a liquid measuring cup or small bowl, add sourdough discard, brown sugar, white sugar and eggs. Whisk together until combined and the sourdough discard incorporates with the sugar and eggs. Then add the yogurt, applesauce, oil, apple cider and vanilla extract. Whisk together until combined.
  • Pour the liquid ingredients on top of the dry ingredients and mix until just combined.
  • Spray a 12 cup muffin tin with cooking spray or line with parchment papers. If you use baking cups, spray them so the muffins come out easily. Scoop about 2/3 cup batter in each pocket.
  • Generously sprinkle granulated sugar and cinnamon over the top of every muffin.
  • Bake muffins for 20-22 minutes at 375°F. Once baked all the way through, pull out of the oven and let cool for 5-10 minutes before removing to a baking rack. Enjoy!

Notes

Sourdough Discard: You can use fresh, bubbly sourdough starter for a mild sourdough flavor. If you don’t mind a more pronounced sourdough flavor, you can use refrigerated discard up to a week or two old.  I always use 100% hydration sourdough discard.
Vegetable Oil: Any neutral-flavored oil works well in this recipe. You can also substitute melted butter if desired.
Apple Cider: For more apple flavor, use an apple cider with strong apple flavor.
Grated Apple: For best flavor, use an apple you like. I like honeycrisp, pink lady or granny smith in these muffins.
Cinnamon/Sugar Mixture: Mix together 1 teaspoon cinnamon with 2 Tablespoons granulated sugar.  Sprinkle liberally on top of the muffins.
Mini Muffin Variation: For mini muffins, bake the muffins for 12-15 minutes total.

Nutrition

Calories: 193kcal, Carbohydrates: 32g, Protein: 4g, Fat: 5g, Saturated Fat: 1g, Polyunsaturated Fat: 3g, Monounsaturated Fat: 1g, Trans Fat: 0.03g, Cholesterol: 31mg, Sodium: 412mg, Potassium: 73mg, Fiber: 1g, Sugar: 14g, Vitamin A: 54IU, Vitamin C: 1mg, Calcium: 24mg, Iron: 1mg

Nutrition information is automatically calculated, so should only be used as an approximation.

Like this? Leave a comment below!

About Amy Coyne

Hi! I'm Amy. Sourdough lover and Kentucky based mama, sharing my best recipes and tips, one bake at a time. So glad you're here!

DOn't Miss These Popular Recipes

5 from 4 votes

Leave a comment

Your email address will not be published. Required fields are marked *

Recipe Rating




24 Comments

  1. Jordan Weitzel says:

    Could you make this into one big bread loaf? I can’t find my muffin tins anywhere!

  2. Suzy says:

    I made these they came out great is there an option to replace the yogurt for nondairy

    Thanks

    1. This recipe doesn’t have a non-dairy substitute suggestion. You can try leaving it out and increasing some of the other liquid ingredients to compensate. You can also try this recipe for sourdough apple bread that doesn’t contain dairy instead (sub the butter in that recipe for a different oil to make it fully dairy free). Hope that helps!

  3. Jenna says:

    These look amazing!! I live in a small town and can’t get apple cider locally. I’m assuming apple juice would be ok to sub… would you adjust any other ingredients to add move flavor?

    1. I’m sorry apple cider isn’t readily available where you live. You can definitely use apple juice instead. Unfortunately, it won’t have as strong of flavor as using apple cider, but your muffins will still be tender and delicious!

  4. Jill says:

    Could these be made into mini loaves of bread instead of muffins? Would the cook time differ?

    1. Amy says:

      I think you could do that. I would probably bake for 25-30 minutes in the mini loaf tins.

      1. Jill says:

        I just pulled the mini loaves out of the oven 12 minutes ago, and couldn’t wait to try them! Absolutely delicious, I made 4 mini loaves, and they baked for 27 minutes. I have tried several of your recipes, and have loved them all!

      2. Amy says:

        So glad it worked well! Thanks for letting me know 🙂

  5. Tamara Ford says:

    5 stars
    I made these the other day and they were very good! I just loved them. Goingon my Christmas morning brunch. Thank you for all tour reat recipes!

    1. Amy says:

      So glad you loved this recipe!

  6. Melissa says:

    5 stars
    Loved these, the flavor is not overwhelming but very fall like and nice texture. Mine made more than 12, about 15 in standard size muffin pan.

    1. Amy says:

      So glad you enjoyed this recipe! Thanks for sharing.

    2. Kathie says:

      5 stars
      These were delicious, not too sweet, and my little grandchildren loved them. That’s a win in my book!

      1. Amy says:

        Love this! So glad you loved these 🙂

    3. Kathie says:

      Yes, I used my mini cupcake pan to make a dozen minis that the grandchildren enjoyed.

  7. Roiby says:

    5 stars
    Just made these and they came out great! I cut my apple into small cubes and then made a crumb topping with some small apple pieces. So far they’re a hit! Thank you!

    1. Amy says:

      So glad you enjoyed them! Thanks for sharing.

  8. Fran says:

    Do these freeze well?

    1. Amy says:

      Yes. Very well.

      1. Fran says:

        Is there something I could substitute for the applesauce?
        I have every other ingredient. I don’t want to have to run out for applesauce.

      2. Amy says:

        You could sub oil instead of the applesauce.

  9. Kris says:

    What an interesting recipe! Can’t wait to try it! 😍🍎🍏🧁🍂🍁